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I had an issue where the Administration reports in Central admin didn't work for my Nintex Workflow environment. Thanks to Peter D on Nintex Connect I was able to fix this issue. Here is what had to be done: You have to add the following lines in you Web.Config file under "Safecontrols": <SafeControl Assembly="Nintex.Workflow.ServerControls, Version=1.0.0.0, Culture=neutral, PublicKeyToken=913f6bae0ca5ae12" Namespace="Nintex.Workflow.ServerControls" TypeName="*" Safe="True" />       <SafeControl Assembly="Nintex.Workflow.ServerControls, Version=1.0.0.0, Culture=neutral, PublicKeyToken=913f6bae0ca5ae12" Namespace="Nintex.Workflow.ServerControls.WebParts" TypeName="*" Safe="True" /> Now the Administration Reports will work in Central Admin.

To see if the XOML file is created by Nintex for a workflow you can use the following URL: http[s]://[servername]/[pathToSite]/[siteName]/NintexWorkflows For more info check: http://mmman.itgroove.net/2012/05/nintex-workflow-2010-server-was-unable-to-process-request-the-file-filename-xoml-is-not-checked-out/

Nintex has a step to step manual on how to upgrade your Nintex Workflow 2013 environment. See link below: http://nintexdownload.com/sl/supportfiles/NW2013_version_history.pdf